BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002B09SP1|AL424916
(995 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1479 1701 0.0
3x_Contig19 550 e-156
>3x_Contig1479
Length = 7316
Score = 1701 bits (854), Expect = 0.0
Identities = 865/870 (99%)
Strand = Plus / Minus
Query: 1 gatcttttcgaagttgaacttacctttttcgtattcctcaattccatatccagtgtcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 gatcttttcgaagttgaacttacctttttcgtattcctcaattccatatccagtgtcact 811
Query: 61 gaccgggaatagtctttgaccattgaattctttcttacccaatggcaagacatgtaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 gaccgggaatagtctttgaccattgaattctttcttacccaatggcaagacatgtaactt 751
Query: 121 ggcgacatcacggacatcacaagcaagaccagctggctggttaaatgggccttcatattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ggcgacatcacggacatcacaagcaagaccagctggctggttaaatgggccttcatattc 691
Query: 181 tggagttgtcttcaaggcttgattaacgatatcagcagaggtattcaaggaagacttagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tggagttgtcttcaaggcttgattaacgatatcagcagaggtattcaaggaagacttagc 631
Query: 241 caaaccgaaagtgaatttttgtggaccgaaaacgtatggagggttcactgtagttaaatt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 630 caaaccgaaagtgaatttttgtggaccgaaaacgtatggagggttcactgtagtcaaatt 571
Query: 301 gaatgtagaattgttgtcctttacaaaatcccaggccaacttttcggcatatttcttaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaatgtagaattgttgtcctttacaaaatcccaggccaacttttcggcatatttcttaga 511
Query: 361 agcaatgtatgcagttacggagttttcacgagcttcttcccaggtgataggattccaaga 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 agcaatgtatgcagtaacggagttttcacgagcttcttcccaggtgataggattccaaga 451
Query: 421 agtttcatcatgaatgawatttgggtcaccggcatgatctaagcgcatgatagctgcata 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 agtttcatcatgaatgaaatttgggtcaccggcatgatctaagcgcatgatagctgcata 391
Query: 481 ggaagatgtaacaattacatgttcgacgttcttaccgtatttttgaatagactcaaggac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ggaagatgtaacaattacatgttcgacgttcttaccgtatttttgaatagactcaaggac 331
Query: 541 agacttggtaccgtgagttgccggaatcaagtagttttcttcgttgctctttgtcaaacc 600
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agacttggtaccgtgagtggccggaatcaagtagttttcttcgttgctctttgtcaaacc 271
Query: 601 aaacgagaatggagaagcagtgtgcaggacgtatttcaagtcagtgtgcttttggaaaac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aaacgagaatggagaagcagtgtgcaggacgtatttcaagtcagtgtgcttttggaaaac 211
Query: 661 agcatcgaaagcgtttggagctgcgatatcaacaacgacttcgaattggtacttaccatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 agcatcgaaagcgtttggagctgcgatatcaacaacgacttcgaattggtacttaccatt 151
Query: 721 tgggtgttccttagccaattccttcttaattggctcagctttttcttcagaacgaactgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 tgggtgttccttagccaattccttcttaattggctcagctttttcttcagaacgaactgt 91
Query: 781 accaacgacttcataaccagcagctagcagctgatctaaaacatgcaacgctatgaaacc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 accaacgacttcataaccagcagctagcagctgatctaaaacatgcaacgctatgaaacc 31
Query: 841 tgacgcacctgtyaataaaactttagcaga 870
|||||||||||| |||||||||||||||||
Sbjct: 30 tgacgcacctgtcaataaaactttagcaga 1
Score = 934 bits (469), Expect = 0.0
Identities = 503/515 (97%), Gaps = 2/515 (0%)
Strand = Plus / Minus
Query: 473 gctgcataggaagatgtaacaattacatgttcgacgttcttaccgtatttttgaatagac 532
|||||| ||||||| ||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 2457 gctgcaaaggaagaagtaactactacatgttcgacgttcttaccgtatttttgaatagac 2398
Query: 533 tcaaggacagacttggtaccgtgagttgccggaatcaagtagttttcttcgttgctcttt 592
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2397 tcaaggacagacttggtaccgtgagtggccggaatcaagtagttttcttcgttgctcttt 2338
Query: 593 gtcaaaccaaacgagaatggagaagcagtgtgcaggacgtatttcaagtcagtgtgcttt 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2337 gtcaaaccaaacgagaatggagaagcagtgtgcaggacgtatttcaagtcagtgtgcttt 2278
Query: 653 tggaaaacagcatcgaaagcgtttggagctgcgatatcaacaacgacttcgaattggtac 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2277 tggaaaacagcatcgaaagcgtttggagctgcgatatcaacaacgacttcgaattggtac 2218
Query: 713 ttaccatttgggtgttccttagccaattccttcttaattggctcagctttttcttcagaa 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2217 ttaccatttgggtgttccttagccaattccttcttaattggctcagctttttcttcagaa 2158
Query: 773 cgaactgtaccaacgacttcataaccagcagctagcagctgatctaaaacatgcaacgct 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2157 cgaactgtaccaacgacttcataaccagcagctagcagctgatctaaaacatgcaacgct 2098
Query: 833 atgaaacctgacgcacctgtyaataaaactttagcagacatctttyttatttcaattatg 892
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 2097 atgaaacctgacgcacctgtcaataaaactttagcagacatctttcttatttcaattatg 2038
Query: 893 ttatcaattgagtwgtcactgggrtagawacctagctcttagtattaccgtaaacttaat 952
||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 2037 ttatcaattgagtagtcactgggatagatacctagctcttagtattaccgtaaacttaat 1978
Query: 953 atcccatatagagacc-attaggagc-aaactgta 985
|||||||||||||||| ||||||||| ||||||||
Sbjct: 1977 atcccatatagagaccaattaggagctaaactgta 1943
Score = 629 bits (316), Expect = e-180
Identities = 416/450 (92%)
Strand = Plus / Minus
Query: 1 gatcttttcgaagttgaacttacctttttcgtattcctcaattccatatccagtgtcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2929 gatcttttcgaagttgaacttacctttttcgtattcctcaattccatatccagtgtcact 2870
Query: 61 gaccgggaatagtctttgaccattgaattctttcttacccaatggcaagacatgtaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2869 gaccgggaatagtctttgaccattgaattctttcttacccaatggcaagacatgtaactt 2810
Query: 121 ggcgacatcacggacatcacaagcaagaccagctggctggttaaatgggccttcatattc 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2809 ggcgacatcacggacatcacaagcaacaccagctggctggttaaatgggccttcatattc 2750
Query: 181 tggagttgtcttcaaggcttgattaacgatatcagcagaggtattcaaggaagacttagc 240
|||||||||||||||||| | || |||| ||||||||||| || ||||||| | ||||
Sbjct: 2749 tggagttgtcttcaaggccttgttgacgaagtcagcagaggtgtttaaggaagccctagc 2690
Query: 241 caaaccgaaagtgaatttttgtggaccgaaaacgtatggagggttcactgtagttaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2689 taaaccgaaagtgaatttttgtggaccgaaaacgtatggagggttcactgtagtcaaatt 2630
Query: 301 gaatgtagaattgttgtcctttacaaaatcccaggccaacttttcggcatatttcttaga 360
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 2629 gaatgtagaattgttgtccttcacgaaatcccaggccaacttttcggcatatttcttaga 2570
Query: 361 agcaatgtatgcagttacggagttttcacgagcttcttcccaggtgataggattccaaga 420
||||| |||| ||| ||| | ||||||||| |||||||| ||| || |||||||
Sbjct: 2569 agcaacatatgaagtagcggcatcttcacgagcgtcttcccaaatgaccgggttccaagt 2510
Query: 421 agtttcatcatgaatgawatttgggtcacc 450
||||||||||| |||| | ||||||||||
Sbjct: 2509 agtttcatcattgatgaaagttgggtcacc 2480
>3x_Contig19
Length = 772
Score = 550 bits (276), Expect = e-156
Identities = 299/308 (97%)
Strand = Plus / Plus
Query: 577 ttcttcgttgctctttgtcaaaccaaacgagaatggagaagcagtgtgcaggacgtattt 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ttcttcgttgctctttgtcaaaccaaacgagaatggagaagcagtgtgcaggacgtattt 72
Query: 637 caagtcagtgtgcttttggaaaacagcatcgaaagcgtttggagctgcgatatcaacaac 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 caagtcagtgtgcttttggaaaacagcatcgaaagcgtttggagctgcgatatcaacaac 132
Query: 697 gacttcgaattggtacttaccatttgggtgttccttagccaattccttcttaattggctc 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gacttcgaattggtacttaccatttgggtgttccttagccaattccttcttaattggctc 192
Query: 757 agctttttcttcagaacgaactgtaccaacgacttcataaccagcagctagcagctgatc 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 agctttttcttcagaacgaactgtaccaacgacttcataaccagcagctagcagctgatc 252
Query: 817 taaaacatgcaacgctatgaaacctgacgcacctgtyaataaaactttagcagacatctt 876
||||||||||| ||| || |||||||| |||||||| |||||||| || |||||||| ||
Sbjct: 253 taaaacatgcagcgcaataaaacctgaagcacctgtcaataaaacctttgcagacatttt 312
Query: 877 tyttattt 884
| ||||||
Sbjct: 313 ttttattt 320
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6457
Number of Sequences: 1807
Number of extensions: 6457
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 2
length of query: 995
length of database: 10,358,551
effective HSP length: 16
effective length of query: 979
effective length of database: 10,329,639
effective search space: 10112716581
effective search space used: 10112716581
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)